Fuming Yang

Research Fellow at Harvard · Incoming PhD student at MIT

fumingy@mit.edu    github    scholar    cv

Fuming Yang

I study two brains in parallel — the artificial and the biological. On the artificial side, I work on representation geometry and training dynamics in AI; on the biological side, I'm leading data-acquisition technologies for the whole mammalian brain connectomics project at Harvard. I'll be starting my PhD at MIT in Fall 2026. Most of my recent work develops new technologies for studying both.

Selected papers

Science of AI
Fuming Yang · arXiv preprint · 2026
A label-free phase coordinate β(t)/βc(t) for representation dynamics, derived from a passive GMM probe and verified across SAEs on Pythia, SSL on CIFAR-10/100, and grokking on modular arithmetic.
5% trained
Fuming Yang · arXiv preprint · 2026
Stop SAE training at 5% on early-to-mid LM layers and recover ≥ 96% per-atom POS purity at 20× less compute. Five-seed evaluation across Pythia-160M / 410M / 1.4B; degrades with layer depth (99% at L6, 88% at L18).
Y. Meirovitch*, F. Yang*, J. W. Lichtman, N. Shavit · arXiv preprint · 2025
An activity-dependent rule that prunes weights during training under a fixed broadcast budget. *Equal contribution.
AI for Science
F. Yang, Y. Meirovitch, J. W. Lichtman · arXiv preprint · 2025
Recovers a global ordering of tens of thousands of EM sections from sparse pairwise alignments via graph condensation and super-chains.
1000×
F. Yang, Y. Li, H. Pfister, J. W. Lichtman, Y. Meirovitch · ISBI 2025
VQ-VAE with a transformer prior reaches ~1000× compression on nanoscale EM volumes while preserving downstream segmentation accuracy.
Y. Meirovitch et al., incl. F. Yang · Nature Neuroscience · 2025
N. Dhanyasi et al., incl. F. Yang · bioRxiv · Nature (in submission)
N. Medina, J. V. Gogola, K. Boergens, F. Yang, et al. · Cell Reports Methods · 2025
F. Bidel, Y. Meirovitch, F. Yang, J. W. Lichtman, B. Hochner · eLife · 2025
E. C. Pavarino et al., incl. F. Yang · Frontiers in Neural Circuits · 2023
Other
S. Almeida, F. Yang, H. Zhang, M. E. Lamb · Journal of Autism and Developmental Disorders · 2024