Fuming Yang

PhD student at MIT ·

fumingy@mit.edu    github    scholar    cv

Fuming Yang

I study two brains in parallel — the artificial and the biological. On the artificial side, I work on representation geometry and training dynamics in AI; on the biological side, I'm leading data-acquisition technologies for the whole mammalian brain connectomics project. Most of my recent work develops new technologies for studying both.

Selected papers

Science of AI
Fuming Yang · arXiv preprint · 2026
A label-free phase coordinate β(t)/βc(t) for representation dynamics, derived from a passive GMM probe and verified across SAEs on Pythia, SSL on CIFAR-10/100, and grokking on modular arithmetic.
5% trained
Fuming Yang · arXiv preprint · 2026
Stop SAE training at 5% on early-to-mid LM layers and recover ≥ 96% per-atom POS purity at 20× less compute. Five-seed evaluation across Pythia-160M / 410M / 1.4B; degrades with layer depth (99% at L6, 88% at L18).
Y. Meirovitch*, F. Yang*, J. W. Lichtman, N. Shavit · arXiv preprint · 2025
An activity-dependent rule that prunes weights during training under a fixed broadcast budget. *Equal contribution.
AI for Science
F. Yang, Y. Meirovitch, J. W. Lichtman · arXiv preprint · 2025
Recovers a global ordering of tens of thousands of EM sections from sparse pairwise alignments via graph condensation and super-chains.
1000×
F. Yang, Y. Li, H. Pfister, J. W. Lichtman, Y. Meirovitch · ISBI 2025
VQ-VAE with a transformer prior reaches ~1000× compression on nanoscale EM volumes while preserving downstream segmentation accuracy.
Y. Meirovitch et al., incl. F. Yang · Nature Neuroscience · 2025
N. Dhanyasi et al., incl. F. Yang · bioRxiv · Nature (in submission)
N. Medina, J. V. Gogola, K. Boergens, F. Yang, et al. · Cell Reports Methods · 2025
F. Bidel, Y. Meirovitch, F. Yang, J. W. Lichtman, B. Hochner · eLife · 2025
E. C. Pavarino et al., incl. F. Yang · Frontiers in Neural Circuits · 2023
Other
S. Almeida, F. Yang, H. Zhang, M. E. Lamb · Journal of Autism and Developmental Disorders · 2024